Residuals of communityPGLMM objects — residuals.communityPGLMM • phyr

Getting different types of residuals for communityPGLMM objects.

# S3 method for communityPGLMM
residuals(
  object,
  type = if (object$family %in% c("binomial", "poisson")) "deviance" else "response",
  scaled = FALSE,
  ...
)

Arguments

object: A fitted model with class communityPGLMM.
type: Type of residuals, currently only "response" for gaussian pglmm; "deviance" (default) and "response" for binomial and poisson pglmm.
scaled: Scale residuals by residual standard deviation for gaussian pglmm.
...: Additional arguments, ignored for method compatibility.

Value

A vector of residuals.